BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB003E05SP1|AL425132
(737 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1440 1403 0.0
>3x_Contig1440
Length = 8228
Score = 1403 bits (701), Expect = 0.0
Identities = 717/729 (98%)
Strand = Plus / Plus
Query: 1 tccttttgavcattctttgccttctcgacttctcttggatctaagtaaccttgcaacaat 60
||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 2990 tccttttgaccattctttgccttctcgacttctcttggatctaagttaccttgcaacaat 3049
Query: 61 ttagcatgtagatmctctagcttgawamcagagawaamatcmaatgggtcaacaacgtwa 120
||||||||||||| ||||||||||| | |||||| || ||| |||||||||||||||| |
Sbjct: 3050 ttagcatgtagatcctctagcttgataccagagataacatccaatgggtcaacaacgtta 3109
Query: 121 cccaaggacttagacatcttacgaccctgagcatcacgaactaaagagtgamagaatact 180
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 3110 cccaaggacttagacatcttacgaccctgagcatcacgaactaaagagtgacagaatact 3169
Query: 181 tccttgaatggaatagagccggtcaactttagacctaacaagatcattctggaaacccag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3170 tccttgaatggaatagagccggtcaactttagacctaacaagatcattctggaaacccag 3229
Query: 241 aagaaaagaatgtcccaaccagtttccaacatggaagctgggtagaattggctcatatct 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3230 aagaaaagaatgtcccaaccagtttccaacatggaagctgggtagaattggctcatatct 3289
Query: 301 ggagtcttatctggccatcctaaagtggagaatgggtatagaccagatgagaaccaggtg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3290 ggagtcttatctggccatcctaaagtggagaatgggtatagaccagatgagaaccaggtg 3349
Query: 361 tccaaaacatcttcgtcttgttccaaagtgtacttcttatcagcaaatttagtggctgcc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3350 tccaaaacatcttcgtcttgttccaaagtgtacttcttatcagcaaatttagtggctgcc 3409
Query: 421 ttagcttcggcttcttccaagtttctacctgacacccagaatgagttatcgttacggtcg 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3410 ttagcttcggcttcttccaagtttctacctgacacccagaatgagttatcgttacggtcg 3469
Query: 481 ttttcttcaccttcaatgttcacgaatwaaacaggacaacggtgaccccaccatagttgt 540
|||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 3470 ttttcttcaccttcaatgttcacgaagtaaacaggacaacggtgaccccaccatagttgt 3529
Query: 541 ctagagatacaccaatcttgaatgttttctaaccaatggaaatattcagattccgaagac 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3530 ctagagatacaccaatcttgaatgttttctaaccaatggaaatattcagattccgaagac 3589
Query: 601 tttggtgtgatggtaatttcaccgtttctaacaactttgatggcttcttcagccatttgc 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3590 tttggtgtgatggtaatttcaccgtttctaacaactttgatggcttcttcagccatttgc 3649
Query: 661 ttttgcgagacccaccattgaggcttcaataatggttcaatgatatcaccagatctcgaa 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3650 ttttgcgagacccaccattgaggcttcaataatggttcaatgatatcaccagatctcgaa 3709
Query: 721 catgttgga 729
|||||||||
Sbjct: 3710 catgttgga 3718
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.39 0.713 1.32
Gapped
Lambda K H
1.39 0.713 1.32
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4896
Number of Sequences: 1807
Number of extensions: 4896
Number of successful extensions: 115
Number of sequences better than 1.0e-20: 1
length of query: 737
length of database: 10,358,551
effective HSP length: 16
effective length of query: 721
effective length of database: 10,329,639
effective search space: 7447669719
effective search space used: 7447669719
T: 0
A: 40
X1: 5 (10.0 bits)
X2: 14 (28.0 bits)
S1: 12 (24.5 bits)
S2: 50 (100.6 bits)